Personlig presentation av Lars Rönnegård

Professor statistik, Statistik

Jag forskar och undervisar i statistik vid Högskolan Dalarna och är professor sen 2012. Under 2016-2018 har jag varit dekan.

Min doktorsavhandling blev klar 2003 med titeln "Selection, Maternal Effects and Inbreeding in Reindeer Husbandry". Avhandling innehåller både tillämpad och teoretisk forskning inom ekologi och husdjursgenetik med fokus på renskötsel.

De senaste åren har jag forskat i statistik med fokus på utvecklingar av blandade linjära modeller för att kunna anpassa geografiskt insamlade data och data där residualvariansen kan antas vara olika för olika observationer. 2017 publicerade jag en bok på ämnet tillsammans med prof. Y. Lee och prof. M. Noh i Korea.

Publikationer

Anglart, D, Emanuelson, U, Rönnegård, Lars, Sandgren, C Hallén. Detecting and predicting changes in milk homogeneity using data from automatic milking systems., Journal of Dairy Science, 2021. Artikel : refereegranskat.
Hallén Sandgren, C, Anglart, D, Klaas, I C, Rönnegård, Lars, Emanuelson, U. Homogeneity density scores of quarter milk in automatic milking systems., Journal of Dairy Science, 2021, Vol. 104, No. 9, 10121-10130. Artikel : refereegranskat.
Anglart, D., Hallén-Sandgren, C., Emanuelson, U., Rönnegård, Lars. Comparison of methods for predicting cow composite somatic cell counts, Journal of Dairy Science, 2020, Vol. 103, No. 9, 8433-8442. Artikel : refereegranskat.
Saqlain, Murshid, Alam, Moudud, Rönnegård, Lars, Westin, Jerker. Investigating Stochastic Differential Equations Modelling for Levodopa Infusion in Patients with Parkinson's Disease, European journal of drug metabolism and pharmacokinetics, 2020, Vol. 45, No. 1, 41-49. Artikel : refereegranskat.
Mouresan, Elena Flavia, Selle, Maria, Rönnegård, Lars. Genomic Prediction Including SNP-Specific Variance Predictors, G3, 2019, Vol. 9, No. 10, 3333-3343. Artikel : refereegranskat.

Rönnegård, Lars. The evolution of peer-reviewed papers., Journal of Animal Breeding and Genetics, 2019, Vol. 136, No. 2, 77-78. Artikel.
Bring, Johan, Rönnegård, Lars. Åldersbedömningar - en statistisk utmaning, Folkvett, 2018, No. 1, 7-13. Artikel : populärvetenskaplig.
Marjanovic, Jovana, Mulder, Han A, Rönnegård, Lars, Bijma, Piter. Modelling the co-evolution of indirect genetic effects and inherited variability, Heredity, 2018, Vol. 121, 631-647. Artikel : refereegranskat.
Saqlain, Murshid, Alam, Moudud, Brandt, Daniel, Rönnegård, Lars, Westin, Jerker. Stochastic differential equations modelling of levodopa concentration in patients with Parkinson's disease, 2018. Konferensbidrag.
Lee, Youngjo, Rönnegård, Lars, Noh, Maengseok. Data Analysis Using Hierarchical Generalized Linear Models with R, CRC Press, 2017. Bok.
Nelson, Ronald M, Temnykh, Svetlana V, Johnson, Jennifer L, Kharlamova, Anastasiya V, Vladimirova, Anastasiya V, Shepeleva, Darya V, Rönnegård, Lars, Trut, Lyudmila N, Carlborg, Örjan, Kukekova, Anna V. Genetics of interactive behavior in silver foxes (Vulpes vulpes), Behavior Genetics, 2017, Vol. 47, No. 1, 88-101. Artikel : refereegranskat.
Silva, C. N. S, McFarlane, S. E, Hagen, I. J, Rönnegård, Lars, Billing, A. M, Kvalnes, T, Kemppainen, P, Rønning, B, Ringsby, T. H, Husby, A. Insights into the genetic architecture of morphological traits in two passerine bird species, Heredity, 2017, Vol. 119, No. 3, 197-205. Artikel : refereegranskat.
Zan, Yanjun, Sheng, Zheya, Lillie, Mette, Rönnegård, Lars, Honaker, Christa F, Siegel, Paul B, Carlborg, Örjan. Artificial selection response due to polygenic adaptation from a multilocus, multiallelic genetic architecture, Molecular biology and evolution, 2017, Vol. 34, No. 10, 2678-2689. Artikel : refereegranskat.
Han, Mengjie, Håkansson, Johan, Rönnegård, Lars. To what extent do neighbouring populations affect local population growth over time?, Population, Space and Place, 2016, Vol. 22, No. 1, 68-83. Artikel : refereegranskat.
Rönnegård, Lars, McFarlane, S. Eryn, Husby, Arlid, Kawakami, Takeshi, Ellegren, Hans, Qvarnström, Anna. Increasing the power of genome wide association studies in natural populations using repeated measures : evaluation and implementation, Methods in Ecology and Evolution, 2016, Vol. 7, No. 7, 792-799. Artikel : refereegranskat.
Sivertsen, Therese R., Åhman, Birgitta, Steyaert, Sam M. J. G., Rönnegård, Lars, Frank, Jens, Segerström, Peter, Støen, Ole-Gunnar, Skarin, Anna. Reindeer habitat selection under the risk of brown bear predation during calving season, Ecosphere, 2016, Vol. 7, No. 11. Artikel : refereegranskat.
Svenson, Kristin, Li, Yujiao, Macuchova, Zuzana, Rönnegård, Lars. Evaluating needs of road maintenance in Sweden with the mixed proportional hazards model, Transportation Research Record, 2016, No. 2589, 51-58. Artikel : refereegranskat.
Youngjo, Lee, Alam, Moudud, Noh, Maengseok, Rönnegård, Lars, Skarin, Anna. Spatial modeling of data with excessive zeros applied to reindeer pellet-group counts, Ecology and Evolution, 2016, Vol. 6, No. 19, 7047-7056. Artikel : refereegranskat.
Alam, Moudud, Rönnegård, Lars, Shen, Xia. Fitting conditional and simultaneous autoregressive spatial models in hglm, The R Journal, 2015, Vol. 7, No. 2, 5-18. Artikel : refereegranskat.
Casals, M., Langohr, K., Carrasco, J. L., Rönnegård, Lars. Parameter estimation of Poisson generalized linear mixed models based on three different statistical principles : a simulation study, SORT - Statistics and Operations Research Transactions, 2015, Vol. 39, No. 2, 281-308. Artikel : refereegranskat.
Husby, Arild, Kawakami, Takeshi, Rönnegård, Lars, Smeds, Linnéa, Ellegren, Hans, Qvarnström, Anna. Genome-wide association mapping in a wild avian population identifies a link between genetic and phenotypic variation in a life-history trait, Proceedings of the Royal Society of London. Biological Sciences, 2015, Vol. 282, No. 1806. Artikel : refereegranskat.
Skarin, Anna, Nellemann, Christian, Rönnegård, Lars, Sandstrom, Per, Lundqvist, Henrik. Wind farm construction impacts reindeer migration and movement corridors, Landscape Ecology, 2015, Vol. 30, No. 8, 1527-1540. Artikel : refereegranskat.
Ahman, Birgitta, Svensson, Kristin, Rönnegård, Lars. High female mortality resulting in herd collapse in free-ranging domesticated reindeer (Rangifer tarandus tarandus) in Sweden, PLOS ONE, 2014, Vol. 9, No. 10. Artikel : refereegranskat.
Alam, Moudud, Rönnegård, Lars, Shen, Xia. Fitting spatial models in the R package: hglm, Working papers in transport, tourism, information technology and microdata analysis, 2014. Rapport.
Shen, Xia, Li, Ying, Rönnegård, Lars, Uden, Peter, Carlborg, Orjan. Application of a genomic model for high-dimensional chemometric analysis, Journal of Chemometrics, 2014, Vol. 28, No. 7, 548-557. Artikel : refereegranskat.
Han, Mengjie, Håkansson, Johan, Rönnegård, Lars. How do neighbouring populations affect local population change over time?, Working papers in transport, tourism, information technology and microdata analysis, 2013. Rapport.
Lee, Youngjo, Alam, Moudud, Noh, M, Rönnegård, Lars, Skarin, Anna. Analyzing spatially correlated counts with excessive zeros : a case of modeling the changes of reindeer distribution, Working papers in transport, tourism, information technology and microdata analysis, 2013. Rapport.
Mulder, Han A., Rönnegård, Lars, Fikse, W Freddy, Veerkamp, R F, Strandberg, E. Estimation of genetic variance for macro- and micro-environmental sensitivity using double hierarchical generalized linear models, Genetics Selection Evolution, 2013, Vol. 45. Artikel : refereegranskat.
Nelson, Ronald Michael, Nettelblad, Carl, Pettersson, Mats E, Shen, Xia, Crooks, Lucy, Besnier, Francois, Alvarez-Castro, José, Rönnegård, Lars, Ek, Weronica, Carlborg, Örjan. MAPfastR : quantitative trait loci mapping in outbred line crosses, G3, 2013, Vol. 12, No. 3, 2147-2149. Artikel : refereegranskat.
Rönnegård, Lars, Felleki, Majbritt, Fikse, W. F., Mulder, H. A., Strandberg, E. Variance component and breeding value estimation for genetic heterogeneity of residual variance in Swedish Holstein dairy cattle, Journal of Dairy Science, 2013, Vol. 96, No. 4, 2627-2636. Artikel : refereegranskat.
Rönnegård, Lars, Lee, Y. Exploring the potential of hierarchical generalized linear models in animal breeding and genetics, Journal of Animal Breeding and Genetics, 2013, Vol. 130, No. 6, 415-416. Artikel : refereegranskat.
Shen, Xia, Alam, Moudud, Fikse, Freddy, Rönnegård, Lars. A novel generalized ridge regression method for quantitative genetics, Genetics, 2013, Vol. 193, No. 4, 1255-1268. Artikel : refereegranskat.
Shen, Xia, Rönnegård, Lars. Issues with data transformation in genome-wide association studies for phenotypic variability, F1000Research, 2013, Vol. 2, No. 200. Artikel : refereegranskat.
Shukur, Ghazi, Rönnegård, Lars. Framtida utmaningar för forskarutbildningen i statistik, Qvintensen, 2013, No. 4, 21-21. Artikel : populärvetenskaplig.
Skarin, Anna, Helleman, Christian, Sandström, Per, Rönnegård, Lars, Lundquist, Henrik. Renar och vindkraft : Studie från anläggningen av två vindkraftparker i Malå sameby, 2013. Rapport.
Sonesson, Anna K, Odegård, Jørgen, Rönnegård, Lars. Genetic heterogeneity of within-family variance of body weight in Atlantic salmon (Salmo salar), Genetics Selection Evolution, 2013, Vol. 45. Artikel : refereegranskat.
Strandberg, E, Felleki, Majbritt, Fikse, W F, Franzén, J, Mulder, H A, Rönnegård, Lars, Urioste, J I, Windig, J J. Statistical tools to select for robustness and milk quality, Advances in Animal Biosciences, 2013, Vol. 4, No. 3, 606-611. Artikel : refereegranskat.
Alvarez-Castro, J.M., Carlborg, Ö., Rönnegård, Lars. Estimation and interpretation of genetic effects with epistasis using the NOIA model, Ingår i: Methods in Molecular Biology, Humana Press, 2012. Kapitel av bok.
Felleki, Majbritt, Lee, Dongwhan, Lee, Youngjo, Gilmour, Arthur R., Rönnegård, Lars. Estimation of breeding values for mean and dispersion, their variance and correlation using double hierarchical generalized linear models, Genetics Research, 2012, Vol. 94, No. 6, 307-317. Artikel : refereegranskat.
Rönnegård, Lars, Valdar, William. Recent developments in statistical methods for detecting genetic loci affecting phenotypic variability, BMC Genetics, 2012, Vol. 13. Artikel : refereegranskat.
Shen, Xia, Pettersson, Mats, Rönnegård, Lars, Carlborg, Örjan. Inheritance beyond plain heritability : variance-controlling genes in Arabidopsis thaliana, PLOS Genetics, 2012, Vol. 8, No. 8. Artikel : refereegranskat.
Al-Sarraj, Razaw, Qie, Weigang, Rönnegård, Lars. Evaluation of variance component estimators based on Henderson's Method, Centre of Biostochastics Research Report, 2011. Rapport.
Besnier, Francois, Wahlberg, Per, Rönnegård, Lars, Ek, Weronika, Andersson, Leif, Siegel, Paul, Carlborg, Örjan. Fine mapping and replication of QTL in outbred chicken advanced intercross lines, Genetics Selection Evolution, 2011, Vol. 43. Artikel : refereegranskat.
Rönnegård, Lars, Fikse, Freddy, Mulder, Herman, Strandberg, E. Breeding Value Estimation for Environmental Sensitivity on a Large Dairy Cattle Data Set, Interbull Meeting : 2011. Konferensbidrag.
Rönnegård, Lars, Rebreyend, Pascal, Håkansson, Johan. Vinterkonferens i rumslig statistik i Dalarna, Qvintensen, 2011, Vol. 2011, No. 4. Artikel.
Rönnegård, Lars, Valdar, William. Detecting major genetic loci controlling phenotypic variability in experimental crosses, Genetics, 2011, Vol. 188, No. 2, 435-447. Artikel : refereegranskat.
Shen, Xia, Rönnegård, Lars, Carlborg, Örjan. Hierarchical likelihood opens a new way of estimating genetic values using genome-wide dense marker maps, BMC Proceedings, 2011, No. 5(Suppl 3). Artikel : refereegranskat.
Shen, Xia, Rönnegård, Lars, Carlborg, Örjan. How to deal with genotype uncertainty in variance component quantitative trait loci analyses, Genetics Research, 2011, Vol. 93, No. 5, 333-342. Artikel : refereegranskat.
Mischenko, Kateryna, Rönnegård, Lars, Holmgren, Sverker, Mishchenko, Vladimir. Assessing a multiple QTL search using the variance component model, Computational biology and chemistry (Print), 2010, Vol. 34, No. 1, 34-41. Artikel : refereegranskat.
Mulder, Herman A, Rönnegård, Lars, Veerkamp, Roel. Prediction of breeding values for mean and environmental variance with an iterative BLUP-procedure, 9th World Congress on Genetics Applied to Livestock Production. WCGALP 2010 conference. : 2010. Konferensbidrag : refereegranskat.
Rönnegård, Lars, Felleki, Majbritt, Fikse, Freddy, Mulder, Herman A., Strandberg, Erling. Genetic heterogeneity of residual variance : estimation of variance components using double hierarchical generalized linear models, Genetics Selection Evolution, 2010, Vol. 42. Artikel : refereegranskat.
Rönnegård, Lars, Lee, Youngjo. Hierarchical generalized linear models have a great potential in genetics and animal breeding, 2010. Konferensbidrag : refereegranskat.
Rönnegård, Lars, Shen, Xia, Alam, Moudud. Hglm: A package for fitting hierarchical generalized linear models, The R Journal, 2010, Vol. 2, No. 2, 20-28. Artikel : refereegranskat.
Shen, Xia, Rönnegård, Lars. Estimation of Parameters in Random Effect Models with Incidence Matrix Uncertainty, 2010. Konferensbidrag.
Rönnegård, Lars, Al-Sarraj, Razaw, von Rosen, Dietrich. Non-iterative variance component estimation in QTL analysis., Journal of Animal Breeding and Genetics, 2009, Vol. 126, No. 1, 110-116. Artikel : refereegranskat.
Rönnegård, Lars, Besnier, Francois, Carlborg, Örjan. Modelling dominance in a flexible intercross analysis, BMC Genetics, 2009, Vol. 10. Artikel : refereegranskat.
Mishchenk, Kateryna, Holmgren, Sverker, Rönnegård, Lars. Newton-type methods for REML estimation in genetic analysis of quantitative traits., Journal of Computational Methods in Sciences and Engineering, 2008, Vol. 8, No. 1,2, 53-67. Artikel : refereegranskat.
Rönnegård, Lars, Besnier, Francois, Carlborg, Örjan. An improved method for QTL detection and identification of within-line segregation in F2 intercross designs, Genetics, 2008, Vol. 178, No. April, 2315-2326. Artikel : refereegranskat.
Rönnegård, Lars, Pong-Wong, Ricardo, Carlborg, Örjan. Defining the assumptions underlying modelling of epistatic QTL using variance component methods., Journal of Heredity, 2008, Vol. 99, No. 4, 421-425. Artikel : refereegranskat.
Rönnegård, Lars, Sand, Håkan, Andren, Henrik, Månsson, Johan, Pehrson, Åke. Evaluation of four methods used to estimate population density of moose (Alces alces), Wildlife Biology, 2008, Vol. 14, No. 3, 358-371. Artikel : refereegranskat.
Rönnegård, Lars, Carlborg, Örjan. Separation of base allele and sampling term effects gives new insights in variance component QTL analysis, BMC Genetics, 2007, Vol. 8, No. 1. Artikel : refereegranskat.
Rönnegård, Lars, Mishchenko, Kateryna, Holmgren, Sverker, Carlborg, Örjan. Increasing the efficiency of variance component quantitative trait loci analysis by using reduced-rank identity-by-descent matrices., Genetics, 2007, Vol. 176, No. July, 1935-1938. Artikel : refereegranskat.
Rönnegård, Lars, Mishchenko, Kateryna, Holmgren, Sverker. Efficient implementation of the AI-REML iteration variance component QTL analysis., Research Report, 2007. Rapport.
Rönnegård, Lars, Carlborg, Ö. A new efficient method for QTL mapping in divergent intercrosses incorporating within line variation, 8th World Congress on Genetics Applied to Livestock Production : 2006. Konferensbidrag.
Mattsson Petersen, Cecilia, Berg, Per E O, Rönnegård, Lars. Quality control of waste to incineration : waste composition analysis in Lidköping, Waste Management & Research, 2005, Vol. 23, No. 6, 527-533. Artikel : refereegranskat.
Carling, Kenneth, Rönnegård, Lars, Roszbach, Kasper. Is Firm Interdependence within Industries Important for Portfolio Credit Risk?, Sveriges Riksbank working paper series, 2004. Rapport.
Rönnegård, Lars, Danell, Ö. Genetic response to selection on reindeer calf weights., Rangifer, 2003, Vol. 23, No. 1, 1-13. Artikel : refereegranskat.
Rönnegård, Lars, Hannu, U. Urval ökar renhjordens produktivitet., Boazudiehtu - Nyhetsblad om forskning och utveckling i renskötseln, 2003, No. 1. Artikel.
Rönnegård, Lars, Woolliams, J.A., Danell, Ö. Breeding schemes in reindeer husbandry, Rangifer, 2003, Vol. 23, No. 2, 45-55. Artikel : refereegranskat.
Rönnegård, Lars, Woolliams, J.A. Predicted rates of inbreeding with additive maternal effects., Genetical Research, 2003, No. 82, 67-77. Artikel : refereegranskat.
Rönnegård, Lars. Selection, Maternal Effects and Inbreeding in Reindeer Husbandry, Swedish University of Agricultural Sciences, 2003. Doktorsavhandling.
Rönnegård, Lars, Danell, Ö. Hjordstrukturering och urval vid slakt, Boazudiehtu - Nyhetsblad om forskning och utveckling i renskötseln, 2002, No. 3. Artikel.
Rönnegård, Lars, Forslund, Pär, Danell, Öje. Lifetime patterns in adult female mass, reproduction and offspring mass in semidomesticated reindeer (Rangifer tarandus tarandus)., Canadian Journal of Zoology, 2002, Vol. 80, No. 12, 2047-2055. Artikel : refereegranskat.
Rönnegård, Lars, Danell, Öje. Gene flow and potential selection response in age-structured subpopulations having a common male pool., Animal Science, 2001, Vol. 72, No. 3, 427-440. Artikel : refereegranskat.

Kursansvarig

Dataanalys och visualisering (AMI23A)